A method for identifying a microorganism having a reduced adaptation to a particular
environment comprising the steps of:
- (1) providing a plurality of microorganisms each of which is independently
mutated by the insertional inactivation of a gene with a nucleic acid comprising
a unique marker sequence so that each mutant contains a different marker sequence,
or clones of the said microorganism;
- (2) providing individually a stored sample of each mutant produced by
step (1) and providing individually stored nucleic acid comprising the unique marker
sequence from each individual mutant;
- (3) introducing a plurality of mutants produced by step (1) into the
said particular environment and allowing those microorganisms which are able to
do so to grow in the said environment;
- (4) retrieving microorganisms from the said environment or a selected
part thereof and isolating the nucleic acid from the retrieved microorganisms;
- (5) comparing any marker sequences in the nucleic acid isolated in step
(4) to the unique marker sequence of each individual mutant stored as in step (2); and
- (6) selecting an individual mutant which does not contain any of the
marker sequences as isolated in step (4).