According to the invention, there is provided a novel soybean variety designated XB00D06. This invention thus relates to the seeds of soybean variety XB00D06, to the plants of soybean XB00D06 to plant parts of soybean variety XB00D06 and to methods for producing a soybean plant produced by crossing plants of the soybean variety XB00D06 with another soybean plant, using XB00D06 as either the male or the female parent.