A method for treating a separation facility is provided according to the invention. The separation facility includes a plurality of membranes for providing separation of a feed product. The method includes steps of providing liquid flow through a plurality of membranes; treating the plurality of membranes with a multiple phase treatment composition comprising a gaseous phase and a liquid phase at a volumetric ratio of the gaseous phase to the liquid phase of at least about 5:1; and providing a liquid flow through the plurality of membranes.