The present invention discloses a method for detecting the presence of an
enterovirus in a clinical sample. The invention additionally discloses a
method for typing an enterovirus in a clinical sample. Both methods
employ a set of primer oligonucleotides for reverse transcription and
amplification that hybridize to conserved regions of the enterovirus
genome, and that provide amplicons that include significant portions of
the VP1 region that are characteristic of the various serotypes. In the
typing method, the invention further provides a database consisting of
nucleotide sequences from prototypical enteroviral serotypes, which is
used to type the clinical sample by comparing the sequence of its
amplicon with each prototypical sequence in the database. The invention
additionally provides mixtures of primer oligonucleotides, and a kit for
use in conducting the typing method that includes a mixture of the primer
oligonucleotides.