In a method to generate an anatomical image of an examination area with a magnetic resonance apparatus as well as computer program and magnetic resonance apparatus for implementation of the method, at least one image data set of the examination area and a parameter value map are loaded. The at least one loaded image data set and the loaded parameter value map are processed into an anatomical image. The processing includes a weighting of elements of the at least one image data set with a weighting factor. The weighting factor depends on a parameter value of the parameter value map corresponding to the respective element of the image data set. The generated weighted anatomical image is displayed and/or stored.