A nano-structure can be focus-patterned while minimizing the generation of a noise pattern by the inventive method which comprises the steps of: (i) mounting a plate having a nano-scale pattern formed thereon by a patterned photoresist layer on an electrode placed in an externally grounded reactor and applying a voltage to the electrode; (ii) accumulating charges selectively onto the photoresist layer on the plate mounted on the electrode; and (iii) introducing charged nanoparticle aerosol into the reactor and guiding the migration of the charged nanoparticles to the uncharged nano-scale pattern region on the plate mounted on the electrode to guide the nanoparticles to adhere to the center region of the pattern.