Systems and methods are provided that compensate for frequency drift due to temperature variation without the need for a temperature sensor. In one embodiment, a navigation receiver with an integrated communication device receives a base station reference signal, which is used to periodically calibrate a local oscillator frequency. In another embodiment, the calibrated local oscillator frequency drives a counter that is used to provide code phase estimation at the start of satellite signal acquisition. To provide temperature compensation in one embodiment, the calibrated local frequency is used to drive one or more counters at different calibration rates (i.e., different time intervals between calibrations). Count values from these counters are used to determine compensation for frequency drift due to temperature variation based on predicted frequency drift variation patterns between calibrations. This temperature compensation does not require a temperature sensor and further improves the accuracy of the code phase estimation.