This invention provides a method of aligning a nanospray capillary needle,
a set of electrodes, and a capillary input to a mass spectrometer. The
electrode system is formed using microengineering technologies, as an
assembly of two separate chips. Each chip is formed on an insulating
plastic substrate. The first chip carries mechanical alignment features
for the capillary electrospray needle and the API mass spectrometer
input, together with a set of partial electrodes. The second chip carries
a set of partial electrodes. The complete electrode system is formed when
the chips are assembled in a stacked configuration, and consists of an
einzel lens capable of initiating a Taylor cone and separating ions from
neutrals by focusing.