A storage device is protected, when interfaced with a host device, by operating a security processor of the storage device in a "security" mode in which the security processor filters commands that are received from the host device and are targeted to the storage controller, and upon determining by the security processor that the "security" mode is no longer required, by operating the security processor in a "safe" mode in which the security processor (i) does not filter commands it receives from the host device and (ii) forwards to a storage controller of the storage device such unfiltered commands.