The present invention provides, as for a method for analyzing the
C-terminal amino acid sequence of a peptide by using a reaction for
successively releasing the C-terminal amino acids of the peptide, which
method can suppress, when successively releasing the C-terminal amino
acids of a peptide of long amino acid length, such a undesirable side
reaction as cleavage of peptide bond in the intermediate position of the
peptide and can carry out the chemical treatment thereof under widely
applicable conditions, a following method wherein a dry sample of a
peptide with long amino acid length is beforehand subjected to an
N-acylation treatment; by using a reaction reagent where an alkanoic acid
anhydride is combined with a small amount of a perfluoroalkanoic acid,
successive release of C-terminal amino acids is conducted under mild
conditions; a hydrolysis treatment is applied; then, selective
fragmentization at site of arginine residue is performed by digestion by
trypsin; thereafter, decreases in molecular weight are measured for the
C-terminal side fragments derived from a series of reaction products by
analysis in negative mode of a MALDI-TOF-MS apparatus; thereby, the
C-terminal amino acid sequence of the peptide sample is identified.