A disk drive controller includes a servo system operable to associate a time stamp with an arrival of a servo wedge, a firmware loop and core PLLs in the read channel. The firmware loop is operable to determine a period between the arrival of a pair of consecutive servo wedges and produce a desired frequency of when to read/write data to disk based on the period between the arrival of a pair of consecutive servo wedges. Processing circuitry is operable to adjust a clock signal, wherein the clock signal itself is not locked to the data and produce a fine control signal for the core PLLs in the read channel. These core PLLs are operable to determine a phase and/or frequency associated with when an analog signal is sampled and/or written to disk, wherein these core PLLs comprises Fractional N Sigma Delta PLLs.