The deployment of multiple embedded operating system components provides a designer with flexibility when customizing an embedded operating system for a target computing device. The embedded operating system components provide extra features to expand the functionality of the target computing device. The ease with which the designer may select various embedded operating system components to deploy from an originating computing device to the target computing device simplifies the design process. Configuration data of a core embedded operating system and configuration data of the deployed embedded operating system components are merged and any conflicts between configuration data are automatically resolved without rebooting the target computing device.