The mobile application security system and method in accordance with the invention increases the overall level of security in using a mobile application. In a preferred embodiment, the system may use a client/server architecture wherein each host of a mobile application is treated as a client and a central computer is treated as the server. In operation, any time that a mobile application is going to jump between hosts, it must first pass through the central computer so that the central computer may perform various security checks. The security checks ensure that the security of the mobile application is not compromised and overcomes the above problems with typical mobile application systems.