A method of analyzing a polynucleotide of interest, comprising providing one
or
more sets of consecutive oligonucleotide primers differing within each set by one
base at the growing end therof; annealing a single strand of the polynucleotide
or a fragment of the polynucleotide to the oligonucleotide primers under hybridization
conditions; subjecting the primers to single base extension reactions with a polymerase
and terminating nucleotides, the terminating nucleotides being mutually distinguishable;
and observing the location and identity of each terminating nucleotide to thereby
analyze the sequence or a part of the nucleotide sequence of the polynucleotide
of interest, is disclosed. An apparatus comprising a solid support to which is
attached at defined locations thereon one or more sets of consecutive oligonucleotide
primers differing within each set by one base at the growing end thereof is also described.