A method of forming a shallow trench isolation (STI) region in a silicon substrate creates an STI region that extends above a top surface of the silicon substrate. A planarizing dielectric layer is formed on the substrate and extends above the field oxide regions. The planarizing dielectric layer is removed by chemical mechanical polishing or blanket etch back, for example, as well as those portions of the field oxide regions that extend above the top surface of the substrate and the active regions. The step height is thereby eliminated or significantly reduced.