Techniques are described for using radio-frequency identification (RFID) tags to track patient-specific materials throughout the manufacturing of indirect bonding trays. A series of RFID tags may be used to track the patient-specific material starting with the taking of a patient's impression at a clinic within a dental impression tray, through the process of casting and forming the indirect bonding tray at a manufacturing facility, back into the clinic where the appliances are bonded to the patient's teeth, and eventually into storage where the left-over materials may be archived. A database may be used to capture unique identifiers for the RFID tags and other information throughout the process.