A system and method for chunk-based indexing of file system content. In one embodiment, the system may include a storage device configured to store data and a file system configured to manage access to the storage device and to store file system content including a plurality of files. The system may further include a search engine configured to construct an index of the file system content. The file system may be further configured to partition a given one of the plurality of files into a plurality of logical chunks, and constructing an index may include generating respective index information associated with each of the plurality of logical chunks.