An optical detection system for a microfluidic device and a dry-focus
microfluidic device compatible with the compact optical detection system
are described. The system includes an LED; means for collimating light
emitted by the LED; an aspherical, fused-silica objective lens; means for
directing the collimated light through the objective onto a microfluidic
device; and means for detecting a fluorescent signal emitted from the
microfluidic device. The working distance between the objective and the
device allows light from an external LED or laser to be brought in along
a diagonal path to illuminate the microfluidic device. The dry-focus
microfluidic device includes multiple channels and multiple closed
optical alignment marks having curved walls. At least one of the channels
is positioned between at least two of the marks. The marks are
illuminated for alignment and focusing purposes by light brought in on a
diagonal path from an external white LED.